Abstract: OBJECTIVE To evaluate the current status of discipline development of disease prevention and control in military hospitals, summarize the achievements and problems in discipline construction, and analyze advantages and disadvantages so as to put forward improvement measures. METHODS'Four horizontal and three vertical' discipline comprehensive evaluation model was built by referring to'The Hospital Discipline Evaluation Index System' issued by the Institute of Hospital Management of Fudan University. The current status and problems that the disease control department of military hospitals confronted were evaluated. RESULTS The result of evaluation showed that the disease control department of the military hospital had three advantages: the high-level talent team was relatively stable, the construction of scientific research platform had a certain foundation, and the work of serving the army was given priority. The existing problems: in terms of talent construction, there was an obvious lack of high-quality reserve talents, and the internal active cultivation of talents needed to be strengthened. In terms of teaching work, the summary of teaching experience was insufficient and the construction of teaching staff was uneven. In terms of discipline scientific research, the scientific research atmosphere was not strong enough and the laboratory construction was seriously lacking. In terms of service guarantee,'medical treatment' and'prevention' have not been deeply integrated, policies and systems were not perfect, supporting facilities were not perfect, and there was no breakthrough in technological development. Suggestions for continuous improvement were given based on the result of evaluation model. CONCLUSION The theoretical framework and index system of the discipline evaluation follow the principles of systematicness, scientificity, objectivity and operability, and change the empirical evaluation into evidence-based evaluation. The results are relatively fair and objective, and the model can provide some forward-looking ideas and practical countermeasures for the construction and development of disease control discipline in military hospitals in the new era.